STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms. (203 aa)    
Predicted Functional Partners:
DPBF3
ABSCISIC ACID-INSENSITIVE 5-like protein 2.
   
  
 0.572
DPBF3-2
ABSCISIC ACID-INSENSITIVE 5-like protein 2.
   
  
 0.572
DPBF3-3
ABSCISIC ACID-INSENSITIVE 5-like protein 2.
   
  
 0.572
HMGB9
High mobility group B protein 9.
    
 0.552
HMGB15
High mobility group B protein 15.
    
 0.552
LAX2
Auxin transporter-like protein 2.
    
 0.544
LAX2-2
Auxin transporter-like protein 2.
    
 0.544
SYD
Chromatin structure-remodeling complex protein SYD.
    
 0.529
SYD-3
Chromatin structure-remodeling complex protein SYD.
    
 0.529
UGT85A2-4
UDP-glycosyltransferase 85A2; Belongs to the UDP-glycosyltransferase family.
      
 0.515
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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