STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
4CL14-coumarate--CoA ligase 1. (552 aa)    
Predicted Functional Partners:
PAL-2
Phenylalanine ammonia-lyase.
  
 
 0.964
PAL
Phenylalanine ammonia-lyase.
  
 
 0.958
CYP73A1
Trans-cinnamate 4-monooxygenase; Belongs to the cytochrome P450 family.
   
 0.952
CYP73A11
Trans-cinnamate 4-monooxygenase; Belongs to the cytochrome P450 family.
   
 0.952
CCR1-7
Cinnamoyl-CoA reductase 1.
  
 
 0.934
ALDH2C4-2
Aldehyde dehydrogenase family 2 member C4; Belongs to the aldehyde dehydrogenase family.
  
 0.929
ALDH2C4-3
Aldehyde dehydrogenase family 2 member C4; Belongs to the aldehyde dehydrogenase family.
  
 0.924
OMT1
Caffeic acid 3-O-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.
     
 0.902
BIBSY212-6
Bibenzyl synthase; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
  
 
 0.763
CCOAOMT1
Caffeoyl-CoA O-methyltransferase 1.
   
 0.759
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.