STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca012505Tropinone reductase-like 3. (249 aa)    
Predicted Functional Partners:
MA16_Dca011395
Alcohol dehydrogenase-like 6.
   
 
 0.914
MA16_Dca008931
Alcohol dehydrogenase-like 4.
   
 
 0.914
MA16_Dca008140
Alcohol dehydrogenase-like 7.
   
 
 0.914
TIC32-15
Short-chain dehydrogenase TIC 32, chloroplastic; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.906
ECH2
Enoyl-CoA hydratase 2, peroxisomal.
  
 
 0.638
MA16_Dca005972
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.589
DRTS
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
   
 
 0.546
DRTS-2
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
   
 
 0.546
PED1
3-ketoacyl-CoA thiolase 2, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.491
MA16_Dca008772
[acyl-carrier-protein] S-malonyltransferase.
  
 
 0.472
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.