STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARGFOrnithine carbamoyltransferase, chloroplastic; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (384 aa)    
Predicted Functional Partners:
MA16_Dca013524
Argininosuccinate synthase, chloroplastic.
  
 
 0.999
SS3-2
Soluble starch synthase 3, chloroplastic/amyloplastic.
  
 
 0.998
MCCA
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial.
 
 
 0.994
MA16_Dca009810
Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.
   
 
 0.987
MA16_Dca008716
Arginase; Belongs to the arginase family.
   
 0.985
ARG7-5
Argininosuccinate lyase.
 
  
 0.974
carA
Carbamoyl-phosphate synthase small chain.
   
 0.967
ILL1
IAA-amino acid hydrolase ILR1-like 1.
    
 0.965
MA16_Dca017612
Aminoacylase.
    
 0.965
PYRB2
Aspartate carbamoyltransferase 2, chloroplastic; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
0.950
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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