STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPCK1-2Phosphoenolpyruvate carboxylase kinase 1. (96 aa)    
Predicted Functional Partners:
TDT
Tonoplast dicarboxylate transporter.
      
 0.679
ALMT9
Aluminum-activated malate transporter 9.
      
 0.678
PPCC
Phosphoenolpyruvate carboxylase 2.
      
 0.610
PPCC-2
Phosphoenolpyruvate carboxylase 2.
      
 0.610
TFIIB-2
Transcription initiation factor IIB.
      
 0.591
TFIIB
Transcription initiation factor IIB.
      
 0.570
PDV2
Plastid division protein PDV2.
     
 0.549
MA16_Dca012809
AP2-like ethylene-responsive transcription factor.
     
 0.540
MA16_Dca009059
AP2-like ethylene-responsive transcription factor.
     
 0.540
MA16_Dca018942
AP2-like ethylene-responsive transcription factor.
     
 0.540
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.