STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca014677PHB domain-containing protein. (373 aa)    
Predicted Functional Partners:
MA16_Dca018969
Pyridoxal phosphate homeostasis protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which may be involved in intracellular homeostatic regulation of pyridoxal 5'- phosphate (PLP), the active form of vitamin B6; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
 
    
 0.696
MA16_Dca024352
PRKCSH domain-containing protein.
     
 0.654
MA16_Dca003136
PRKCSH domain-containing protein.
     
 0.654
ALG11-2
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase.
   
    0.647
MA16_Dca004997
Cir_N domain-containing protein.
   
    0.646
RMA1H1-2
E3 ubiquitin-protein ligase RMA1H1.
   
 0.604
RMA1
E3 ubiquitin-protein ligase RMA1.
   
 0.604
RMA3
E3 ubiquitin-protein ligase RMA3.
   
 0.604
RMA1H1-3
E3 ubiquitin-protein ligase RMA1H1.
   
 0.604
RMA1-2
E3 ubiquitin-protein ligase RMA1.
   
 0.604
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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