STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATJ39-2Chaperone protein dnaJ 39. (532 aa)    
Predicted Functional Partners:
MA16_Dca000615
Uncharacterized protein.
   
 
 0.797
MAP2A
Methionine aminopeptidase 2A.
   
 
 0.717
CHLG
Chlorophyll synthase, chloroplastic.
   
 
 0.717
MA16_Dca012920
C2H2-type domain-containing protein.
   
 
 0.697
MA16_Dca011284
Uncharacterized protein.
   
 
 0.691
MA16_Dca008006
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
    
 
 0.662
MA16_Dca003965
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
    
 
 0.662
MA16_Dca003964
Uncharacterized protein.
    
 
 0.662
MA16_Dca013405
Elongation factor 2.
      
 0.537
EIF6-2
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
    
 
 0.479
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.