STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca008601Uncharacterized protein. (582 aa)    
Predicted Functional Partners:
FIE2
Polycomb group protein FIE2.
    
 0.647
ELF6
Putative lysine-specific demethylase ELF6.
   
 0.608
MA16_Dca012228
B30.2/SPRY domain-containing protein.
    
 0.572
Mut11-8
Protein Mut11.
    
 0.569
MA16_Dca013082
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
   
 0.455
DAG-3
DAG protein, chloroplastic.
   
 0.446
EMF2
Polycomb group protein EMBRYONIC FLOWER 2.
    
 0.440
EMF2-2
Polycomb group protein EMBRYONIC FLOWER 2.
    
 0.440
UBICEP52-7
Ubiquitin-60S ribosomal protein L40.
    
  0.439
MA16_Dca026049
Ubiquitin-60S ribosomal protein L40.
    
  0.439
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.