STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca010172Uncharacterized protein. (850 aa)    
Predicted Functional Partners:
LD
Homeobox protein LUMINIDEPENDENS.
  
  
  0.684
UPL5
E3 ubiquitin-protein ligase UPL5.
    
 0.638
MA16_Dca013400
Sec39 domain-containing protein.
  
  
  0.636
MA16_Dca013247
Uncharacterized protein.
     
 0.635
MA16_Dca004287
Uncharacterized protein.
   
 
  0.574
MA16_Dca000985
Uncharacterized protein.
   
 
  0.574
MA16_Dca018054
Uncharacterized protein.
     
 0.571
CLASP
CLIP-associated protein.
  
   
 0.549
CYTB5-A
Cytochrome b5 isoform A; Belongs to the cytochrome b5 family.
      
 0.538
MA16_Dca023197
Uncharacterized protein.
  
   
 0.508
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.