STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca017472Uncharacterized protein. (146 aa)    
Predicted Functional Partners:
MA16_Dca023016
Uncharacterized protein.
  
     0.498
MA16_Dca000890
Uncharacterized protein.
   
  
 0.444
MA16_Dca004766
Uncharacterized protein.
  
     0.443
MA16_Dca000515
ClpS domain-containing protein.
   
  
 0.443
MA16_Dca010913
Uncharacterized protein.
      
 0.442
MA16_Dca019896
Uncharacterized protein.
      
 0.442
MA16_Dca020244
Uncharacterized protein.
      
 0.442
FBX5-4
Protein ARABIDILLO 1.
      
 0.441
MA16_Dca003393
Pyruvate dehydrogenase E2 component (Dihydrolipoamide acetyltransferase).
  
     0.441
MA16_Dca013750
Thioredoxin-like protein HCF164, chloroplastic.
  
     0.435
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.