STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL1Serine/threonine-protein phosphatase. (890 aa)    
Predicted Functional Partners:
MA16_Dca000802
Uncharacterized protein.
    
   0.940
MA16_Dca003868
Uncharacterized protein.
    
 0.892
MA16_Dca017266
WW domain-containing protein.
   
 0.882
PP2AA2
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform.
   
 0.882
MA16_Dca007715
Uncharacterized protein.
   
 0.882
KEG
E3 ubiquitin-protein ligase KEG.
   
 0.747
MA16_Dca014271
Uncharacterized protein.
    
 0.746
CKA1
Casein kinase II subunit alpha-1; Belongs to the protein kinase superfamily.
   
 0.731
MA16_Dca010950
Casein kinase II subunit alpha, chloroplastic; Belongs to the protein kinase superfamily.
   
 0.731
XBOS33-2
Putative E3 ubiquitin-protein ligase XBOS33.
   
 0.724
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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