STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABH1B-2Ras-related protein RABH1b. (208 aa)    
Predicted Functional Partners:
VPS33
Vacuolar protein sorting-associated protein 33 like; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.917
MA16_Dca015410
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.912
MA16_Dca010629
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.912
MA16_Dca005455
Uncharacterized protein.
    
 0.884
MA16_Dca003862
Vps53_N domain-containing protein.
    
 0.851
MA16_Dca020945
Uncharacterized protein.
    
 0.808
RANBP1C
Ran-binding protein 1 like c.
    
 0.804
RANBP1B
Ran-binding protein 1 like b.
    
 0.804
GRIP
Protein GRIP.
    
 0.804
ARF-3
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.799
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.