STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPK3Calcium-dependent protein kinase 3. (521 aa)    
Predicted Functional Partners:
RBOHC
Respiratory burst oxidase like protein C.
   
 
 0.680
RBOHA
Respiratory burst oxidase like protein A.
   
 
 0.671
SLAC1
Guard cell S-type anion channel SLAC1.
    
 
 0.456
MA16_Dca020750
Putative LRR receptor-like serine/threonine-protein kinase.
     
 0.452
CML30
Putative calcium-binding protein CML30.
   
 0.449
CML45-2
Putative calcium-binding protein CML45.
   
 0.449
CML10-3
Putative calcium-binding protein CML10.
   
 0.447
CML11
Calmodulin-like protein 11.
   
 0.447
PCM1-3
Calmodulin-1.
   
 0.447
CML17
Putative calcium-binding protein CML17.
   
 0.431
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.