STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAMP726-3Vesicle-associated membrane protein 726; Belongs to the synaptobrevin family. (219 aa)    
Predicted Functional Partners:
VPS33
Vacuolar protein sorting-associated protein 33 like; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.648
AGD14
Putative ADP-ribosylation factor GTPase-activating protein AGD14.
    
 0.573
MA16_Dca006069
Uncharacterized protein.
    
 
 0.552
MA16_Dca000797
Vps16_N domain-containing protein.
    
 
 0.552
SNAP33
SNAP25 likeous protein SNAP33.
    
 0.523
SNAP33-2
SNAP25 likeous protein SNAP33.
    
 0.523
SNAP33-4
SNAP25 likeous protein SNAP33.
    
 0.523
MA16_Dca005650
Uncharacterized protein.
    
 0.523
SNAP33-5
SNAP25 likeous protein SNAP33.
    
 0.523
MA16_Dca020292
Alpha-soluble NSF attachment protein.
    
 0.458
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.