MOS2 protein (Dendrobium catenatum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MOS2

Protein MOS2. (392 aa)

Predicted Functional Partners:

MA16_Dca012419

0.980

PUB49-5

0.950

MA16_Dca004066

0.948

MA16_Dca012546

0.942

MA16_Dca010199

0.936

PUB49-3

0.929

MA16_Dca023288

0.898

MA16_Dca017822

0.864

PUB49

0.850

SE

0.838

Your Current Organism:

Dendrobium catenatum

NCBI taxonomy Id: 906689
Other names: D. catenatum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MA16_Dca004066	MA16_Dca010199	A0A2I0X2B3	A0A2I0WAE0	Uncharacterized protein.	Zinc finger CCCH domain-containing protein 1.	0.953
MA16_Dca004066	MA16_Dca012419	A0A2I0X2B3	A0A2I0WYB8	Uncharacterized protein.	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase.	0.817
MA16_Dca004066	MA16_Dca012546	A0A2I0X2B3	A0A2I0W563	Uncharacterized protein.	MI domain-containing protein.	0.969
MA16_Dca004066	MA16_Dca017822	A0A2I0X2B3	A0A2I0XG87	Uncharacterized protein.	Uncharacterized protein.	0.854
MA16_Dca004066	MA16_Dca023288	A0A2I0X2B3	A0A2I0X637	Uncharacterized protein.	MPN domain-containing protein.	0.960
MA16_Dca004066	MOS2	A0A2I0X2B3	A0A2I0WH76	Uncharacterized protein.	Protein MOS2.	0.948
MA16_Dca004066	PUB49	A0A2I0X2B3	A0A2I0VQU7	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.680
MA16_Dca004066	PUB49-3	A0A2I0X2B3	A0A2I0W4Q2	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase-like 2.	0.680
MA16_Dca004066	PUB49-5	A0A2I0X2B3	A0A2I0WL05	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase-like 2.	0.956
MA16_Dca010199	MA16_Dca004066	A0A2I0WAE0	A0A2I0X2B3	Zinc finger CCCH domain-containing protein 1.	Uncharacterized protein.	0.953
MA16_Dca010199	MA16_Dca012419	A0A2I0WAE0	A0A2I0WYB8	Zinc finger CCCH domain-containing protein 1.	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase.	0.789
MA16_Dca010199	MA16_Dca012546	A0A2I0WAE0	A0A2I0W563	Zinc finger CCCH domain-containing protein 1.	MI domain-containing protein.	0.992
MA16_Dca010199	MA16_Dca017822	A0A2I0WAE0	A0A2I0XG87	Zinc finger CCCH domain-containing protein 1.	Uncharacterized protein.	0.854
MA16_Dca010199	MA16_Dca023288	A0A2I0WAE0	A0A2I0X637	Zinc finger CCCH domain-containing protein 1.	MPN domain-containing protein.	0.921
MA16_Dca010199	MOS2	A0A2I0WAE0	A0A2I0WH76	Zinc finger CCCH domain-containing protein 1.	Protein MOS2.	0.936
MA16_Dca010199	PUB49	A0A2I0WAE0	A0A2I0VQU7	Zinc finger CCCH domain-containing protein 1.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.934
MA16_Dca010199	PUB49-3	A0A2I0WAE0	A0A2I0W4Q2	Zinc finger CCCH domain-containing protein 1.	Peptidyl-prolyl cis-trans isomerase-like 2.	0.934
MA16_Dca010199	PUB49-5	A0A2I0WAE0	A0A2I0WL05	Zinc finger CCCH domain-containing protein 1.	Peptidyl-prolyl cis-trans isomerase-like 2.	0.993
MA16_Dca012419	MA16_Dca004066	A0A2I0WYB8	A0A2I0X2B3	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase.	Uncharacterized protein.	0.817
MA16_Dca012419	MA16_Dca010199	A0A2I0WYB8	A0A2I0WAE0	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase.	Zinc finger CCCH domain-containing protein 1.	0.789