STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALDH6B2Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial. (268 aa)    
Predicted Functional Partners:
MA16_Dca014380
Putative 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial.
   
 0.952
MA16_Dca026829
Putative 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial.
   
 0.951
MA16_Dca011823
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
   
 0.951
BCE2
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 
 0.944
MA16_Dca017821
Putative acetyl-CoA acetyltransferase, cytosolic 2; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.941
PED1
3-ketoacyl-CoA thiolase 2, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.939
ACX1-2
Peroxisomal acyl-coenzyme A oxidase 1.
   
 
 0.933
MA16_Dca024686
Alanine--glyoxylate aminotransferase 2 like 3, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 
 0.932
AGT2
Alanine--glyoxylate aminotransferase 2 like 1, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 
 0.931
ALDH2B7-2
Aldehyde dehydrogenase family 2 member B7, mitochondrial; Belongs to the aldehyde dehydrogenase family.
  
0.931
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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