STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPK16Calcium-dependent protein kinase 16. (571 aa)    
Predicted Functional Partners:
RBOHC
Respiratory burst oxidase like protein C.
   
 
 0.764
RBOHA
Respiratory burst oxidase like protein A.
   
 
 0.713
CML10-3
Putative calcium-binding protein CML10.
   
 0.481
CML11
Calmodulin-like protein 11.
   
 0.481
PCM1-3
Calmodulin-1.
   
 0.481
HT1-11
Serine/threonine-protein kinase HT1.
  
 
  0.476
HT1-13
Serine/threonine-protein kinase HT1.
  
 
  0.475
MA16_Dca018071
Putative leucine-rich repeat receptor-like serine/threonine-protein kinase.
  
  0.462
CML30
Putative calcium-binding protein CML30.
   
 0.449
CML30-2
Putative calcium-binding protein CML30.
   
 0.449
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.