STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GA20ox1B-3Gibberellin 20 oxidase 1-B; Belongs to the iron/ascorbate-dependent oxidoreductase family. (392 aa)    
Predicted Functional Partners:
IPT8
Adenylate isopentenyltransferase 8, chloroplastic.
      
 0.516
COL5
Zinc finger protein CONSTANS-LIKE 5.
   
  
 0.510
CYP707A5
Abscisic acid 8'-hydroxylase 1; Belongs to the cytochrome P450 family.
      
 0.510
BKI1
Putative BRI1 kinase inhibitor 1.
      
 0.510
COL5-2
Zinc finger protein CONSTANS-LIKE 5.
   
  
 0.510
COL5-3
Zinc finger protein CONSTANS-LIKE 5.
   
  
 0.510
CYP707A5-2
Abscisic acid 8'-hydroxylase 1; Belongs to the cytochrome P450 family.
      
 0.510
BKI1-2
Putative BRI1 kinase inhibitor 1.
      
 0.510
BKI1-3
BRI1 kinase inhibitor 1.
      
 0.510
COL5-5
Zinc finger protein CONSTANS-LIKE 5.
   
  
 0.510
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.