STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUT1-23-ketoacyl-CoA synthase. (470 aa)    
Predicted Functional Partners:
KCR1
Very-long-chain 3-oxoacyl-CoA reductase 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.782
KCR1-2
Very-long-chain 3-oxoacyl-CoA reductase 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.782
KCR1-3
Very-long-chain 3-oxoacyl-CoA reductase 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.782
MA16_Dca002869
Uncharacterized protein.
   
 0.730
MA16_Dca003634
Uncharacterized protein.
   
 0.717
MA16_Dca008750
Uncharacterized protein.
   
 0.643
CYP87A3
Cytochrome P450 87A3; Belongs to the cytochrome P450 family.
    
 
 0.642
CYP87A3-2
Cytochrome P450 87A3; Belongs to the cytochrome P450 family.
    
 
 0.642
CYP87A3-3
Cytochrome P450 87A3; Belongs to the cytochrome P450 family.
    
 
 0.642
CYP87A3-4
Cytochrome P450 87A3; Belongs to the cytochrome P450 family.
    
 
 0.642
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.