STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARR15Two-component response regulator ARR15. (132 aa)    
Predicted Functional Partners:
PIF3
Transcription factor PIF3.
    
 
 0.645
GGT1
Gamma-glutamyltranspeptidase 1.
      
 0.638
CYP90A1
Cytochrome P450 90A1; Belongs to the cytochrome P450 family.
      
 0.638
CYP90A1-2
Cytochrome P450 90A1; Belongs to the cytochrome P450 family.
      
 0.567
HY5
Transcription factor HY5.
    
 0.558
HY5-2
Transcription factor HY5.
    
 0.557
CCD4
Putative carotenoid cleavage dioxygenase 4, chloroplastic.
   
  
 0.555
LAF1
Transcription factor LAF1.
     
 0.531
LAF1-2
Transcription factor LAF1.
     
 0.531
MA16_Dca022895
Npa1 domain-containing protein.
      
 0.511
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.