STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHT1-3Lysine histidine transporter 1. (449 aa)    
Predicted Functional Partners:
BAT1-2
Amino-acid permease BAT1.
   
  
 0.521
BAT1-6
Amino-acid permease BAT1.
   
  
 0.521
CAT5
Cationic amino acid transporter 5.
   
  
 0.513
CAT5-2
Cationic amino acid transporter 5.
   
  
 0.513
PTR1
Peptide transporter PTR1.
      
 0.510
PTR1-2
Peptide transporter PTR1.
      
 0.510
MYB29
Transcription factor MYB29.
      
 0.420
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.