STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDHBGlutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (413 aa)    
Predicted Functional Partners:
P5CS
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
    
 0.958
GLT1
Glutamate synthase 1 [NADH], chloroplastic.
  
 0.955
NIR1
Ferredoxin--nitrite reductase, chloroplastic.
     
 0.942
GLN1-1
Glutamine synthetase.
  
 
 0.936
MA16_Dca011634
Glutamine synthetase nodule isozyme; Belongs to the glutamine synthetase family.
  
 
 0.936
MA16_Dca025490
Aspartate aminotransferase.
   
 0.931
ASP5-2
Aspartate aminotransferase, chloroplastic.
   
 0.931
ASP1-5
Aspartate aminotransferase.
   
 0.931
GAD1
Glutamate decarboxylase 1.
   
 
 0.930
MA16_Dca005740
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
 
 0.930
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.