STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca001085RING-type domain-containing protein. (462 aa)    
Predicted Functional Partners:
CHLI
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family.
  
 0.974
CHLH
Magnesium-chelatase subunit ChlH, chloroplastic.
  
 0.849
COQ3
Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial.
   
 0.762
MA16_Dca003472
Magnesium-protoporphyrin O-methyltransferase.
   
 0.762
PPOX1
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
   
 
 0.658
PPXII
Protoporphyrinogen oxidase, mitochondrial.
   
 
 0.658
trpG
Anthranilate synthase component II.
    
  0.598
HEMC
Porphobilinogen deaminase, chloroplastic.
  
  
 0.552
MA16_Dca028679
Uncharacterized protein.
     
 0.549
MA16_Dca024186
SnoaL-like domain-containing protein.
     
 0.549
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.