STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CML29-2Putative calcium-binding protein CML29. (595 aa)    
Predicted Functional Partners:
MA16_Dca028448
Nucleoside diphosphate kinase 1; Belongs to the NDK family.
    
 0.944
NDK4
Nucleoside diphosphate kinase.
    
 0.944
NDPK2
Nucleoside diphosphate kinase.
    
 0.944
MA16_Dca027881
Inosine triphosphate pyrophosphatase.
    
  0.905
MA16_Dca011254
Inosine triphosphate pyrophosphatase; Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
    
  0.905
APY6
Putative apyrase 6; Belongs to the GDA1/CD39 NTPase family.
   
 
  0.900
APY6-2
Putative apyrase 6; Belongs to the GDA1/CD39 NTPase family.
   
 
  0.900
APY6-3
Putative apyrase 6; Belongs to the GDA1/CD39 NTPase family.
   
 
  0.900
MA16_Dca024450
Uncharacterized protein.
     
  0.900
RIBBA-2
Riboflavin biosynthesis protein ribBA, chloroplastic.
  
 
  0.822
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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