STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYP22-4Syntaxin-22. (214 aa)    
Predicted Functional Partners:
YKT61
VAMP-like protein YKT61; Belongs to the synaptobrevin family.
   
 0.900
MA16_Dca020292
Alpha-soluble NSF attachment protein.
    
 0.885
BET11
Bet1-like SNARE 1-1.
   
 0.791
BET11-2
Bet1-like SNARE 1-1.
   
 0.791
VPS33
Vacuolar protein sorting-associated protein 33 like; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.787
SYP52
Syntaxin-52; Belongs to the syntaxin family.
    
 0.778
SYP61-3
Syntaxin-61.
    
 0.778
VTI13
Vesicle transport v-SNARE 13.
   
 0.762
VTI13-2
Vesicle transport v-SNARE 13.
   
 0.762
VPS41
Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic.
    
 
 0.754
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.