STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDIL2-2Protein disulfide isomerase-like 2-2; Belongs to the protein disulfide isomerase family. (360 aa)    
Predicted Functional Partners:
AERO1
Endoplasmic oxidoreductin-1.
    
 0.948
HSP70-17
Heat shock 70 kDa protein 17.
   
 0.632
BAS1
2-Cys peroxiredoxin BAS1, chloroplastic.
  
 0.615
BAS1-2
2-Cys peroxiredoxin BAS1, chloroplastic.
  
 0.615
MA16_Dca020292
Alpha-soluble NSF attachment protein.
   
 
 0.571
CNX1
Calnexin like 1.
   
 0.552
CNX1-3
Calnexin like 1.
   
 0.552
CRT3
Calreticulin.
   
 0.548
CRT1
Calreticulin.
   
 0.548
MA16_Dca004483
Calreticulin.
   
 0.548
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.