STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca000093Oryzain alpha chain. (85 aa)    
Predicted Functional Partners:
MA16_Dca000802
Uncharacterized protein.
    
  0.958
DRG1
Developmentally regulated G-protein 1.
    
   0.912
MA16_Dca010158
DNA polymerase epsilon subunit 2.
    
   0.912
SFC1
Mitochondrial succinate-fumarate transporter 1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.912
CKA1
Casein kinase II subunit alpha-1; Belongs to the protein kinase superfamily.
    
 
 0.863
MA16_Dca010950
Casein kinase II subunit alpha, chloroplastic; Belongs to the protein kinase superfamily.
    
 
 0.863
MA16_Dca014370
Citrate synthase.
   
   0.862
CS
Citrate synthase; Belongs to the citrate synthase family.
   
   0.862
MA16_Dca028318
Low-temperature-induced cysteine proteinase.
  
 0.817
AAC3
ADP,ATP carrier protein 3, mitochondrial.
   
   0.769
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
Server load: low (18%) [HD]