STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPK4Calcium-dependent protein kinase 4. (554 aa)    
Predicted Functional Partners:
RBOHC
Respiratory burst oxidase like protein C.
   
 
 0.729
RBOHA
Respiratory burst oxidase like protein A.
   
 
 0.715
CML29
Putative calcium-binding protein CML29.
   
 0.509
CML10-3
Putative calcium-binding protein CML10.
   
 0.489
CML11
Calmodulin-like protein 11.
   
 0.489
PCM1-3
Calmodulin-1.
   
 0.489
RAC7-4
Mitochondrial Rho GTPase.
   
 0.417
MPK5
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
  
0.416
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.