STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYR1Glyoxylate/succinic semialdehyde reductase 1. (294 aa)    
Predicted Functional Partners:
MA16_Dca009536
Putative gamma-aminobutyrate transaminase 3, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.951
ALDH5F1
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.934
GGAT2
Glutamate--glyoxylate aminotransferase 2.
     
 0.904
HPR3
Glyoxylate/hydroxypyruvate reductase HPR3; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.903
GLO4
Peroxisomal (S)-2-hydroxy-acid oxidase GLO4.
     
 0.902
GLYK
D-glycerate 3-kinase, chloroplastic.
     
  0.900
GLO5
Peroxisomal (S)-2-hydroxy-acid oxidase GLO5.
     
  0.900
PGLP2
Phosphoglycolate phosphatase 2.
     
  0.900
GLO5-2
Peroxisomal (S)-2-hydroxy-acid oxidase GLO5.
     
  0.900
PGLP1B
Phosphoglycolate phosphatase 1B, chloroplastic.
     
  0.900
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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