STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XYLT-2Beta-(1,2)-xylosyltransferase. (495 aa)    
Predicted Functional Partners:
FUT12
Fucosyltransferase-like protein.
   
 
 0.942
MA16_Dca012639
Alpha-1,6-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase.
     
 0.926
XYLT
Beta-(1,2)-xylosyltransferase.
  
  
 
0.901
IRX10L
Putative beta-1,4-xylosyltransferase IRX10L; Belongs to the glycosyltransferase 47 family.
   
  
 0.684
IRX9
Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family.
      
 0.682
IRX15
Protein IRREGULAR XYLEM 15.
      
 0.670
IRX10
Putative beta-1,4-xylosyltransferase IRX10; Belongs to the glycosyltransferase 47 family.
      
 0.641
F8H
Putative glucuronoxylan glucuronosyltransferase F8H; Belongs to the glycosyltransferase 47 family.
      
 0.639
GT4-3
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.636
GUX1
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
      
 0.631
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.