STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATPK2-3Non-specific serine/threonine protein kinase. (557 aa)    
Predicted Functional Partners:
PDPK1
3-phosphoinositide-dependent protein kinase 1.
  
 
0.946
MA16_Dca023187
Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family.
    
 0.883
MA16_Dca016131
Uncharacterized protein.
    
 0.883
TOR
Serine/threonine-protein kinase TOR.
    
 0.883
RAPTOR1
Regulatory-associated protein of TOR 1.
    
 0.860
RAPTOR1-2
Regulatory-associated protein of TOR 1.
    
 0.860
rps6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.858
rps6-2
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.858
MA16_Dca005229
ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]
   
 
 0.818
TIC
Protein TIME FOR COFFEE.
   
 0.807
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.