STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLPP4-2ATP-dependent Clp protease proteolytic subunit. (158 aa)    
Predicted Functional Partners:
clpP
ATP-dependent Clp protease proteolytic subunit.
  
 
 
0.885
CLPR3
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
  
 
0.874
CLPP5-2
ATP-dependent Clp protease proteolytic subunit.
  
 
0.855
CLPP5
ATP-dependent Clp protease proteolytic subunit.
  
 
0.854
CLPP3-2
ATP-dependent Clp protease proteolytic subunit.
  
  
0.842
CLPP3
ATP-dependent Clp protease proteolytic subunit 3, chloroplastic.
   
   0.834
CLPR1
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
  
 
 
0.829
MA16_Dca004568
Clp protease-related protein.
   
 
 0.721
MA16_Dca011782
Uncharacterized protein.
  
 
 0.719
MA16_Dca009440
ClpB_D2-small domain-containing protein.
  
 
 0.719
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.