STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca004099CHZ domain-containing protein. (488 aa)    
Predicted Functional Partners:
H2B-2
Histone H2B; Belongs to the histone H2B family.
    
   0.808
MA16_Dca020329
Uncharacterized protein.
    
 
 0.636
MA16_Dca024003
Histone H2B; Belongs to the histone H2B family.
    
   0.627
H2B-4
Histone H2B; Belongs to the histone H2B family.
    
   0.627
MA16_Dca026921
Histone H2A; Belongs to the histone H2A family.
   
   0.484
H2A-4
Histone H2A; Belongs to the histone H2A family.
   
   0.484
MA16_Dca005442
Histone H2A; Belongs to the histone H2A family.
   
   0.484
MA16_Dca003909
Tubulin-specific chaperone A; Belongs to the TBCA family.
   
    0.437
MA16_Dca004210
Uncharacterized protein.
  
     0.414
MA16_Dca012655
WAPL domain-containing protein.
  
     0.410
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.