STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TYRAAT2-2Arogenate dehydrogenase 2, chloroplastic. (409 aa)    
Predicted Functional Partners:
HPA
Histidinol-phosphate aminotransferase, chloroplastic.
  
 
 0.994
ADT2
Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine.
 
 
 0.991
ADT6-2
Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine.
 
 
 0.984
MA16_Dca016858
Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase.
   
 0.983
ADT6
Arogenate dehydratase/prephenate dehydratase 6, chloroplastic.
 
 
 0.966
ADT3
Arogenate dehydratase 3, chloroplastic.
  
 
 0.966
MA16_Dca025490
Aspartate aminotransferase.
    
 0.962
ASP5-2
Aspartate aminotransferase, chloroplastic.
    
 0.962
ASP1-5
Aspartate aminotransferase.
    
 0.962
MA16_Dca025159
Putative aminotransferase TAT2.
    
 0.944
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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