STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca005403Aminopeptidase. (883 aa)    
Predicted Functional Partners:
SCPL51
Serine carboxypeptidase-like 51; Belongs to the peptidase S10 family.
   
  
 0.622
P5CS
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
  
  
 0.600
MA16_Dca014009
Serpin-ZXA; Belongs to the serpin family.
    
 0.483
PAZX
Serpin-ZX; Belongs to the serpin family.
    
 0.483
PAZX-2
Serpin-ZX; Belongs to the serpin family.
    
 0.483
LPD1
Dihydrolipoyl dehydrogenase.
  
 0.464
LPD1-2
Dihydrolipoyl dehydrogenase 1, mitochondrial.
  
 0.464
LPD
Dihydrolipoyl dehydrogenase, mitochondrial.
  
 0.464
LPD1-3
Dihydrolipoyl dehydrogenase 1, mitochondrial.
  
 0.464
POSF21
Putative transcription factor PosF21.
   
 
 0.462
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.