STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBSCBSPB5CBS domain-containing protein CBSCBSPB5. (541 aa)    
Predicted Functional Partners:
trpG
Anthranilate synthase component II.
  
 
 0.633
LSF1
Phosphoglucan phosphatase LSF1, chloroplastic.
   
 0.585
MA16_Dca010549
Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase.
  
 
 0.548
MA16_Dca010554
Uncharacterized protein.
  
 
 0.539
MA16_Dca008824
GMP synthase (Glutamine-hydrolysing).
  
 
 0.529
MA16_Dca007396
Glutamine amidotransferase type-1 domain-containing protein.
  
 
 0.529
MA16_Dca023209
GMP synthase (Glutamine-hydrolysing).
  
 
 0.529
DSP4
Phosphoglucan phosphatase DSP4, chloroplastic.
   
 0.496
LPD1
Dihydrolipoyl dehydrogenase.
   
   0.479
LPD1-2
Dihydrolipoyl dehydrogenase 1, mitochondrial.
   
   0.479
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.