STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRT3-2Calreticulin. (434 aa)    
Predicted Functional Partners:
MA16_Dca010396
Endoplasmin.
   
 0.902
HSP70-17
Heat shock 70 kDa protein 17.
   
 0.826
CNX1
Calnexin like 1.
  
0.797
CNX1-3
Calnexin like 1.
  
0.797
PDIL1-4
Protein disulfide-isomerase.
   
 0.702
MA16_Dca024259
LEA_2 domain-containing protein.
   
 0.702
PDIL5-2
Protein disulfide-isomerase 5-2.
   
 0.702
PDIL5-2-2
Protein disulfide isomerase-like 5-2.
   
 0.702
MA16_Dca025664
Uncharacterized protein.
   
 0.702
PDIL1-6
Protein disulfide isomerase-like 1-6.
   
 0.702
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.