STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca006172Triosephosphate isomerase, cytosolic. (253 aa)    
Predicted Functional Partners:
MA16_Dca001048
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 
 0.995
GAPC2
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
 0.993
MA16_Dca010545
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 
 0.993
MA16_Dca020397
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 
 0.991
GAPA1
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
 0.986
GAPB
Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic.
  
 0.979
MA16_Dca013169
2,3-bisphosphoglycerate-independent phosphoglycerate mutase.
  
 0.971
MA16_Dca023434
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.966
MA16_Dca009042
Putative phosphoglycerate mutase.
  
 0.965
MA16_Dca017901
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase.
  
 0.965
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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