STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UXS6-2UDP-glucuronic acid decarboxylase 6. (345 aa)    
Predicted Functional Partners:
UGD4-2
UDP-glucose 6-dehydrogenase.
 
 0.977
UGD4
UDP-glucose 6-dehydrogenase.
 
 0.974
UXS5
UDP-glucuronic acid decarboxylase 5.
  
  
0.931
UEL-1
Putative UDP-arabinose 4-epimerase 1.
    
0.921
UEL-3
Putative UDP-arabinose 4-epimerase 3.
    
0.921
USP-2
UDP-sugar pyrophosphorylase.
   
 
 0.912
CSLD5
Cellulose synthase-like protein D5; Belongs to the glycosyltransferase 2 family.
     
 0.904
GAE1
UDP-glucuronate 4-epimerase 1.
    
0.730
GAE1-2
UDP-glucuronate 4-epimerase 1.
    
0.730
GAE6
UDP-glucuronate 4-epimerase 6.
    
0.726
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.