STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUDT23Nudix hydrolase 23, chloroplastic. (292 aa)    
Predicted Functional Partners:
MA16_Dca020358
FAD_syn domain-containing protein.
    
 0.954
NUDT14
Nudix hydrolase 14, chloroplastic.
    
 0.943
MA16_Dca026067
Uncharacterized protein.
     
 0.936
MA16_Dca016656
Riboflavin kinase.
  
 
 0.932
MA16_Dca024450
Uncharacterized protein.
    
 0.906
PGM1
Phosphoglucomutase, cytoplasmic.
     
  0.900
PRS1
Ribose-phosphate pyrophosphokinase 1.
     
  0.900
MA16_Dca013074
Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase.
     
  0.900
MA16_Dca002041
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
  
 
 0.655
MA16_Dca022636
Riboflavin kinase.
  
  
 0.579
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.