STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOP5-2-3Putative nucleolar protein 5-2. (559 aa)    
Predicted Functional Partners:
NOP5-2-2
Putative nucleolar protein 5-2.
  
0.997
MA16_Dca004821
Coatomer subunit beta'-1.
   
 0.991
RACK1B-3
Guanine nucleotide-binding protein subunit beta-like protein B.
   
 0.989
MA16_Dca005221
U3 small nucleolar RNA-associated protein 18 like.
   
 0.984
RACK1C
Guanine nucleotide-binding protein subunit beta-like protein C.
   
 0.981
MA16_Dca023558
Ribosomal_L7Ae domain-containing protein.
   
 0.980
MED36B
Putative mediator of RNA polymerase II transcription subunit 36b.
   
 0.980
MED36B-2
Putative mediator of RNA polymerase II transcription subunit 36b.
   
 0.980
MA16_Dca000208
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.980
MA16_Dca003958
U3snoRNP10 domain-containing protein.
   
 0.980
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.