STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca010076Tropinone reductase like. (279 aa)    
Predicted Functional Partners:
MA16_Dca005972
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.589
DRTS
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
   
 
 0.546
DRTS-2
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
   
 
 0.546
MA16_Dca023729
Tropinone reductase-like 3.
  
     0.523
MA16_Dca014890
Tropinone reductase-like 3.
  
     0.520
CLKR27-3
3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
0.497
SDR3b-3
Short-chain dehydrogenase reductase 3b.
  
     0.478
MA16_Dca008772
[acyl-carrier-protein] S-malonyltransferase.
  
 
 0.472
KCR1-3
Very-long-chain 3-oxoacyl-CoA reductase 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.466
CLKR27-2
3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic.
  
     0.458
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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