STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca020729Putative cytosolic iron-sulfur protein assembly protein CIAO1 like. (345 aa)    
Predicted Functional Partners:
MA16_Dca005698
LisH domain-containing protein.
 
      0.898
RKP
E3 ubiquitin-protein ligase RKP.
   
 
 0.862
UPL3
E3 ubiquitin-protein ligase UPL3.
   
  
 0.798
UPL4
E3 ubiquitin-protein ligase UPL4.
   
  
 0.798
MA16_Dca009563
CTLH domain-containing protein.
   
 
 0.745
MA16_Dca008690
Importin subunit alpha-1b.
    
 
 0.742
MA16_Dca013610
Uncharacterized protein.
    
 
 0.644
MA16_Dca015684
Uncharacterized protein.
    
 
 0.565
MA16_Dca017263
CTLH domain-containing protein.
    
 
 0.565
MA16_Dca020176
Uncharacterized protein.
    
 
 0.565
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.