STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FPP3Filament-like plant protein 3. (749 aa)    
Predicted Functional Partners:
HMGB9
High mobility group B protein 9.
    
 
 0.610
HMGB15
High mobility group B protein 15.
    
 
 0.610
MA16_Dca013478
WEB family protein.
  
 
  0.537
MA16_Dca021392
WEB family protein.
  
 
  0.532
MFP1-1
MAR-binding filament-like protein 1-1.
  
 
 0.517
MA16_Dca020389
Uncharacterized protein.
  
 
  0.513
MA16_Dca001093
TAF domain-containing protein.
    
  0.513
MA16_Dca011561
WEB family protein.
  
 
  0.507
DAW1-19
Dynein assembly factor with WDR repeat domains 1.
    
  0.507
MA16_Dca014910
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
    
  0.504
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.