STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca003200Uncharacterized protein. (236 aa)    
Predicted Functional Partners:
MA16_Dca019012
CCHC-type domain-containing protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
   
 
 0.854
ROA1
DNA helicase; Belongs to the MCM family.
   
 0.844
MA16_Dca021794
Putative inactive protein kinase.
    
 
 0.825
Mut11-3
Protein Mut11.
   
 
 0.807
MA16_Dca010858
Uncharacterized protein.
    
 
 0.735
MA16_Dca010859
TIMELESS_C domain-containing protein.
    
 
 0.735
MA16_Dca021065
Uncharacterized protein.
    
 0.728
MA16_Dca013227
Uncharacterized protein.
    
 0.728
MA16_Dca004328
Uncharacterized protein.
   
 0.708
CDKF-4-3
Cyclin-dependent kinase F-4.
    
 0.674
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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