STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTR1-7Serine/threonine-protein kinase CTR1; Belongs to the protein kinase superfamily. (342 aa)    
Predicted Functional Partners:
MKK4-2
Mitogen-activated protein kinase kinase 4.
  
 
  0.513
MIP1
MND1-interacting protein 1.
    
 0.491
MIP1-2
MND1-interacting protein 1.
    
 0.491
CIPK23-3
CBL-interacting serine/threonine-protein kinase 23.
  
 
 
0.478
PBS1
Serine/threonine-protein kinase PBS1.
  
 
  0.460
PPCK1-5
Phosphoenolpyruvate carboxylase kinase 1; Belongs to the protein kinase superfamily.
  
 
  0.443
CLC-D
Chloride channel protein.
      
 0.434
ANP2-2
Mitogen-activated protein kinase kinase kinase 2; Belongs to the protein kinase superfamily.
  
 
  0.425
PERK1-4
Proline-rich receptor-like protein kinase PERK1.
  
 
  0.424
FLCY
Farnesylcysteine lyase.
      
 0.420
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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