STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLU-3Ferredoxin-dependent glutamate synthase, chloroplastic. (202 aa)    
Predicted Functional Partners:
MA16_Dca014799
NADPH:adrenodoxin oxidoreductase, mitochondrial.
  
 0.952
P5CS
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
    
 0.830
trpG
Anthranilate synthase component II.
  
 
 0.663
MA16_Dca024185
Rieske domain-containing protein.
  
 
 0.637
IDH5
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 
 0.601
MA16_Dca018974
Glutamate dehydrogenase (NADP+).
  
 0.588
GDH1
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.569
FAO4B
Long-chain-alcohol oxidase FAO4B.
  
 0.569
GDH2
Glutamate dehydrogenase 2; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.569
MA16_Dca013730
Occludin_ELL domain-containing protein.
  
 0.569
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.