STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca023864Uncharacterized protein. (1070 aa)    
Predicted Functional Partners:
XBOS33-2
Putative E3 ubiquitin-protein ligase XBOS33.
  
 0.767
HSP70-17
Heat shock 70 kDa protein 17.
   
 0.766
MA16_Dca008859
J domain-containing protein.
  
 0.715
TTL1
TPR repeat-containing thioredoxin TTL1.
  
 0.690
TTL1-2
TPR repeat-containing thioredoxin TTL1.
  
 0.690
TTL1-3
TPR repeat-containing thioredoxin TTL1.
  
 0.690
ISU1
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
 
 0.657
TDX-2
TPR repeat-containing thioredoxin TDX.
   
 0.621
ATJ10-3
Chaperone protein dnaJ 10.
  
 0.597
ATJ20-4
Chaperone protein dnaJ 20, chloroplastic.
  
 0.597
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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