STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca017309Putative aquaporin NIP-type; Belongs to the MIP/aquaporin (TC 1.A.8) family. (246 aa)    
Predicted Functional Partners:
SDP6
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.523
RPT6A
26S protease regulatory subunit 8 like A.
  
 
 0.495
RPT6A-2
26S protease regulatory subunit 8 like A; Belongs to the AAA ATPase family.
  
 
 0.495
RPT2B
26S proteasome regulatory subunit 4 like B.
  
 
 0.495
MA16_Dca010010
D-ribulokinase.
  
 
 0.495
MA16_Dca019228
ATPase family AAA domain-containing protein.
  
 
 0.495
AAA1-7
Katanin p60 ATPase-containing subunit A1.
  
 
 0.495
RPT1
26S protease regulatory subunit 7; Belongs to the AAA ATPase family.
  
 
 0.495
RPT2B-2
26S proteasome regulatory subunit 4 like B; Belongs to the AAA ATPase family.
  
 
 0.495
MA16_Dca025080
ATPase family AAA domain-containing protein.
  
 
 0.495
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.