STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca009805Uncharacterized protein. (579 aa)    
Predicted Functional Partners:
VPS41
Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic.
    
 
 0.972
MA16_Dca008841
Ras-related protein Rab7.
    
 0.850
MA16_Dca022741
Ras-related protein Rab7.
    
 0.850
MA16_Dca020156
Ras-related protein Rab7.
    
 0.850
MA16_Dca012408
Ras-related protein Rab7.
    
 0.850
MA16_Dca019839
Ras-related protein Rab7.
    
 0.850
MA16_Dca015410
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.772
MA16_Dca010629
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.772
MA16_Dca012625
Vacuolar protein sorting-associated protein 11 homolog; Involved in regulating membrane fusion at the tonoplast and the prevacuolar compartment.
    
 
 0.767
MA16_Dca011830
RING-type domain-containing protein.
    
 
 0.642
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
Server load: low (18%) [HD]